Uses of Class
pal.substmodel.NucleotideModel
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Packages that use NucleotideModel Package Description pal.substmodel Classes describing substitution models, i.e. -
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Uses of NucleotideModel in pal.substmodel
Subclasses of NucleotideModel in pal.substmodel Modifier and Type Class Description classF81Felsenstein 1981 model of nucleotide evolutionclassF84Felsenstein 1984 (PHYLIP) model of nucleotide evolutionclassGTRGTR (general time reversible) model of nucleotide evolution Lanave, C., G.classHKYHasegawa-Kishino-Yano model of nucleotide evolution Hasegawa, M., H.classTNTamura-Nei model of nucleotide evolution Tamura, K.Methods in pal.substmodel that return NucleotideModel Modifier and Type Method Description static NucleotideModelNucleotideModel. getInstance(int modelID, double[] params, double[] freq)Create nucleotide substitution model according to model type
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