Uses of Interface pal.eval.LikelihoodCalculator

Packages that use LikelihoodCalculator
Package Description

pal.eval
Classes for evaluating evolutionary hypothesis (chi-square and likelihood criteria) and estimating model parameters.

Packages that use LikelihoodCalculator
Package	Description
pal.eval	Classes for evaluating evolutionary hypothesis (chi-square and likelihood criteria) and estimating model parameters.

Classes in pal.eval that implement LikelihoodCalculator
Modifier and Type	Class	Description
`class`	`FastLikelihoodCalculator`	Title: Fast Likelihood Calculator Description: A fast likelihood calculator Original code by Matthew Goode.
`class`	`GeneralLikelihoodCalculator`	Title: General Likelihood Calculator Description: A General likelihood calculator This calculates the likelihood of an topologically invariant tree (on an unchanging alignment) quickly by remembering partial likelihoods of invariant subtrees, and by essentially generating site patterns for each sub tree.
`class`	`SimpleLikelihoodCalculator`

Uses of Interfacepal.eval.LikelihoodCalculator